| 1. | KPP Barabéri "B" | 28 | 25 | 0 | 3 | 130 | : | 39 | 75 |
| 2. | FCK Minimax "B" | 28 | 19 | 2 | 7 | 137 | : | 61 | 59 |
| 3. | AK 47 "B" | 28 | 18 | 4 | 6 | 111 | : | 72 | 58 |
| 4. | Omnikor | 28 | 17 | 6 | 5 | 100 | : | 60 | 57 |
| 5. | Slovmatic FOFO "C" | 28 | 17 | 6 | 5 | 113 | : | 63 | 57 |
| 6. | FSC Velmáci | 28 | 15 | 2 | 11 | 94 | : | 76 | 47 |
| 7. | Budweiser | 28 | 14 | 4 | 10 | 112 | : | 101 | 46 |
| 8. | SF Festglas | 28 | 11 | 4 | 13 | 91 | : | 108 | 37 |
| 9. | Dobraklima.sk | 28 | 11 | 4 | 13 | 97 | : | 123 | 37 |
| 10. | 4FUN Futsal Team "B" | 28 | 8 | 2 | 18 | 70 | : | 122 | 26 |
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| 11. | Arsenal EC "B" | 28 | 12 | 6 | 10 | 87 | : | 69 | 42 |
| 12. | FT Pressburg K-INEX Energia "B" | 28 | 10 | 6 | 12 | 89 | : | 92 | 36 |
| 13. | TV Com Hurricanes | 28 | 10 | 5 | 13 | 77 | : | 89 | 35 |
| 14. | SFC PAS Petržalka | 28 | 9 | 6 | 13 | 73 | : | 92 | 33 |
| 15. | Akademik '96 "A" | 28 | 9 | 6 | 13 | 86 | : | 96 | 33 |
| 16. | AFC Horden | 28 | 9 | 6 | 13 | 69 | : | 94 | 33 |
| 17. | FC Rusovce | 28 | 8 | 5 | 15 | 65 | : | 91 | 29 |
| 18. | FPV 23 "A" | 28 | 7 | 7 | 14 | 72 | : | 102 | 28 |
| 19. | Solmag Silicon | 28 | 7 | 3 | 18 | 74 | : | 92 | 24 |
| 20. | United | 28 | 2 | 0 | 26 | 69 | : | 174 | 6 |